Computational Chemistry
MARCEL dataset Kraken ligand example in 3D conformation

MARCEL: Molecular Representation and Conformer Ensemble Learning

MARCEL dataset provides 722K+ conformers across 76K+ molecules for drug discovery, catalysis, and molecular …

Computational Chemistry

DenoiseVAE: Learning Molecule-Adaptive Noise Distributions for Denoising-based 3D Molecular Pre-training

Liu et al.'s ICLR 2025 paper introducing DenoiseVAE, which learns adaptive, atom-specific noise for better molecular …...