Computational Chemistry

Img2Mol: Accurate SMILES Recognition from Molecular Graphical Depictions

Clevert et al.'s two-stage CNN approach for converting molecular images to SMILES using CDDD embeddings and extensive …...

Computational Chemistry

MolNexTR: A Generalized Deep Learning Model for Molecular Image Recognition

Chen et al.'s dual-stream encoder approach for robust molecular structure recognition from diverse real-world images …...

Document Processing
A colored molecule with annotations, representing the diverse drawing styles found in scientific papers that OCSR models must handle.

MolParser-7M and WildMol Datasets for Robust Chemical Structure Recognition

MolParser-7M is a 7.7M-pair dataset for molecule-to-text conversion, featuring real-world images and complex structures …

Computational Chemistry

MolParser: End-to-end Visual Recognition of Molecule Structures in the Wild

Fang et al.'s method for converting molecular structure images from scientific documents into machine-readable formats …...

Computational Chemistry

DenoiseVAE: Learning Molecule-Adaptive Noise Distributions for Denoising-based 3D Molecular Pre-training

Liu et al.'s ICLR 2025 paper introducing DenoiseVAE, which learns adaptive, atom-specific noise for better molecular …...

Computational Chemistry

Beyond Atoms: Enhancing Molecular Pretrained Representations with 3D Space Modeling

Lu et al. introduce SpaceFormer, a Transformer that models entire 3D molecular space—not just atoms—for superior …...

Computational Chemistry

Efficient and Scalable Density Functional Theory Hamiltonian Prediction through Adaptive Sparsity

Luo et al. introduce SPHNet, using adaptive sparsity to dramatically improve SE(3)-equivariant Hamiltonian prediction …...

Computational Chemistry

Learning Smooth and Expressive Interatomic Potentials for Physical Property Prediction

Fu et al. propose energy conservation as a key MLIP diagnostic and introduce eSEN, bridging test accuracy and real …...

Computational Chemistry

The Dark Side of the Forces: Assessing Non-Conservative Force Models for Atomistic Machine Learning

Bigi et al. critique non-conservative force models in ML potentials, showing their simulation failures and proposing …...

Generative Modeling

A Contrastive Learning Approach for Training Variational Autoencoder Priors

Dai et al.'s NeurIPS 2021 paper introducing Noise Contrastive Priors (NCPs) to address VAE's 'prior hole' problem with …...

Computational Chemistry
Comparison of 2D molecular graph versus 3D conformer ensemble showing latanoprost molecule in multiple conformations

GEOM Dataset: 3D Molecular Conformer Generation

Learn how GEOM transforms 2D molecular graphs into dynamic 3D conformer ensembles for molecular machine learning …

Deep Learning

3D Steerable CNNs: Learning Rotationally Equivariant Features in Volumetric Data

Weiler et al.'s NeurIPS 2018 paper introducing SE(3)-equivariant CNNs for volumetric data using group theory and …...