Computational Chemistry
Chemical structures and molecular representations feeding into a neural network model that processes atomized chemical knowledge

ChemDFM-R: Chemical Reasoner LLM

A 14B-parameter chemical reasoning LLM enhanced with atomized functional group knowledge and mix-sourced distillation …

Computational Chemistry
ChemBERTa masked language modeling visualization showing SMILES string CC(=O)O with masked tokens

ChemBERTa: Molecular Property Prediction via Transformers

A systematic evaluation of RoBERTa transformers pretrained on 77M PubChem SMILES for molecular property prediction …

Computational Chemistry
MERMaid pipeline diagram showing PDF processing through VisualHeist segmentation, DataRaider VLM mining, and KGWizard graph construction to produce chemical knowledge graphs

MERMaid: Multimodal Reaction Mining

Vision-language pipeline extracting chemical reaction data from PDF figures and tables into structured knowledge graphs …

Computational Chemistry
AtomLenz learns atom-level detection from hand-drawn molecular images with weak supervision

AtomLenz: Atom-Level OCSR with Limited Supervision

Weakly supervised OCSR framework combining object detection and graph construction to recognize chemical structures from …

Computational Chemistry
ChemReco: Hand-Drawn Chemical Structure Recognition

ChemReco: Hand-Drawn Chemical Structure Recognition

A deep learning method using EfficientNet and Transformer to convert hand-drawn chemical structures into SMILES codes, …

Computational Chemistry
DECIMER.ai: Optical Chemical Structure Recognition

DECIMER.ai: Optical Chemical Structure Recognition

Open-source OCSR platform combining Mask R-CNN segmentation and Transformer recognition, trained on 450M+ synthetic …

Computational Chemistry
MolGrapher: Graph-based Visual Recognition of Chemical Structures

MolGrapher: Graph-based Chemical Recognition

A graph-based deep learning approach for optical chemical structure recognition that outperforms image captioning …

Computational Chemistry
OCSU: Optical Chemical Structure Understanding

OCSU: Optical Chemical Structure Understanding

OCSU task for translating molecular images into multi-level descriptions. Introduces Vis-CheBI20 dataset and …

Computational Chemistry
Handwritten chemical structure recognition with RCGD and SSML

Handwritten Chemical Structure Recognition with RCGD

An end-to-end framework (RCGD) and unambiguous markup language (SSML) for recognizing complex handwritten chemical …

Computational Chemistry

MolMiner: Deep Learning OCSR with YOLOv5 Detection

Deep learning OCSR tool using YOLOv5 and MobileNetV2 to extract machine-readable molecular structures from scientific …

Computational Chemistry

SwinOCSR: Vision Transformers for Chemical OCR

Deep learning model using Swin Transformer and Focal Loss for OCSR, achieving 98.58% accuracy on synthetic benchmarks.

Computational Chemistry

Deep Learning for Molecular Structure Extraction

An end-to-end deep learning approach using U-Net and CNN-LSTM to segment and predict chemical structures from document …